The detailed information of tRNA gene sequence


Sequence ID>WENV180094521
Genome IDMTBK01012136
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5657
End posion on genome 5582
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcggccacga
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCGTCGGTTCGAGC
CCGATCAGCTCCACCA
Downstream region at tRNA end position 
ggctcgggcc
Secondary structure (Cloverleaf model)
>WENV180094521	Ala	TGC
                   a      ACCA ggctcgggcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T A G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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