The detailed information of tRNA gene sequence


Sequence ID>WENV180094541
Genome IDMTBK01013894
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 97
End posion on genome 10
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctcctatta
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGGCCTGCGAGGGCCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaaccn
Secondary structure (Cloverleaf model)
>WENV180094541	Ser	TGA
                   a      GCCA caaaaaaccn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGGCCTGCGAGGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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