The detailed information of tRNA gene sequence


Sequence ID>WENV180094544
Genome IDMTBK01014184
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 51311
End posion on genome 51238
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tgcagtcctt
tRNA gene sequence 
GCCTTCTTAGCTCAGCTGGTAGAGCAGCTCATTCGTAATGAGCAGGTCGCGGGTTCGAGT
CCCGTGGAAGGCTCta
Downstream region at tRNA end position 
aagaatagga
Secondary structure (Cloverleaf model)
>WENV180094544	Thr	CGT
                   t      TCta aagaatagga
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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