The detailed information of tRNA gene sequence


Sequence ID>WENV180094554
Genome IDMTBK01014949
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 296
End posion on genome 210
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgcggtatgt
tRNA gene sequence 
GCCGAAGTGGTGGAACAGGCAGACACGCGGTGTTCAGGGCGCCGTGGGCGTGAGCCCGTG
TGGGTTCAAATCCCACCTTCGGCACCA
Downstream region at tRNA end position 
tatttgttag
Secondary structure (Cloverleaf model)
>WENV180094554	Leu	CAG
                   t      ACCA tatttgttag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C A A        G      | | | | |     A
    A       G G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGGGCGTGAGCCCGT
                    C - G
                    G - C
                    G - C
                    T + G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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