The detailed information of tRNA gene sequence


Sequence ID>WENV180094559
Genome IDMTBK01015462
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 488
End posion on genome 563
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cattttgcgc
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCAAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tttttatgtg
Secondary structure (Cloverleaf model)
>WENV180094559	Trp	CCA
                   c      GCCA tttttatgtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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