The detailed information of tRNA gene sequence


Sequence ID>WENV180094561
Genome IDMTBK01015570
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1976
End posion on genome 2051
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
acctgtgcgg
tRNA gene sequence 
GGGCGTGTAGCTCAGCTGGGAGAGTGCCTGGTTCGCATCCAGGAGGTCAGGGGTTCGAGT
CCCCTCACGTCCACCA
Downstream region at tRNA end position 
ggtgaagatg
Secondary structure (Cloverleaf model)
>WENV180094561	Ala	CGC
                   g      ACCA ggtgaagatg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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