The detailed information of tRNA gene sequence


Sequence ID>WENV180094563
Genome IDMTBK01015592
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 273
End posion on genome 349
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaacgagtgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGCAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atttggttgg
Secondary structure (Cloverleaf model)
>WENV180094563	Trp	CCA
                   c      GCCA atttggttgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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