The detailed information of tRNA gene sequence


Sequence ID>WENV180094579
Genome IDMTBK01016194
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5412
End posion on genome 5336
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catctaacat
tRNA gene sequence 
GGCGGCATAGCTTAGCTGGCTAGAGCGTCCGGTTCATACCCGGAAGGTCACAGGTTCGAC
CCCTGTTGCCGCTACCA
Downstream region at tRNA end position 
tattctggag
Secondary structure (Cloverleaf model)
>WENV180094579	Met	CAT
                   t      ACCA tattctggag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          C C
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       T T C G       A C A G G     C
    G       + | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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