The detailed information of tRNA gene sequence


Sequence ID>WENV180094582
Genome IDMTBK01016194
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4640
End posion on genome 4564
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttctaatag
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGATCGCCA
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>WENV180094582	Asp	GTC
                   g      GCCA ttttatttta
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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