The detailed information of tRNA gene sequence


Sequence ID>WENV180094592
Genome IDMTBK01016411
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 774
End posion on genome 699
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnntaaaa
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCGTCGGTTCGAAC
CCGTCATTCTCCACCA
Downstream region at tRNA end position 
aataatcata
Secondary structure (Cloverleaf model)
>WENV180094592	Ala	TGC
                   a      ACCA aataatcata
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C A
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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