The detailed information of tRNA gene sequence


Sequence ID>WENV180094593
Genome IDMTBK01016443
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1191
End posion on genome 1100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgggaattt
tRNA gene sequence 
GGAAGGGTGCTTGAGTGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGCTTGATCGCC
CTCCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ttataacgtg
Secondary structure (Cloverleaf model)
>WENV180094593	Ser	GCT
                   t      GCCA ttataacgtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGCTTGATCGCCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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