The detailed information of tRNA gene sequence


Sequence ID>WENV180094600
Genome IDMTBK01017038
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 698
End posion on genome 608
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcccggcat
tRNA gene sequence 
GGAGAAGTACCCAAGAGGTCGAAGGGGACGGTTTGCTAAACCGTTAGTGGGGGCAACTCC
AGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
aaaaatccca
Secondary structure (Cloverleaf model)
>WENV180094600	Ser	GCT
                   t      GCCA aaaaatccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TAGTGGGGGCAACTCCAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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