The detailed information of tRNA gene sequence


Sequence ID>WENV180094601
Genome IDMTBK01017093
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 82
End posion on genome 157
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggtactagaT
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCCCAGGTTCAAG
TCCTGGTGGGCCCAGtt
Downstream region at tRNA end position 
tttaaaggcg
Secondary structure (Cloverleaf model)
>WENV180094601	Ile2	CAT
                   T      AGtt tttaaaggcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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