The detailed information of tRNA gene sequence


Sequence ID>WENV180094608
Genome IDMTBK01017409
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2588
End posion on genome 2503
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtccctgctc
tRNA gene sequence 
GGAACGGTGGCAGAGCGGACAAATGCACCCGCCTTGAAAGCGGGAGGCCCGCAAGGGCCC
GGGGGTTCGAATCCCTCCCGTTCCGCtg
Downstream region at tRNA end position 
ctgaggtagt
Secondary structure (Cloverleaf model)
>WENV180094608	Ser	TGA
                   c      GCtg ctgaggtagt
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C A A        A     AGGCCCGCAAGGGCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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