The detailed information of tRNA gene sequence


Sequence ID>WENV180094609
Genome IDMTBK01017583
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 712
End posion on genome 801
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctgcggcgcc
tRNA gene sequence 
GGACGGAAGGGTGGCCGAGTGGTTAAAGGCAGCAGACTGTAAATCTGCCCGCGCAAGCGT
ACGCTAGTTCGAATCTAGCCCTGTCCACCA
Downstream region at tRNA end position 
ccatccccta
Secondary structure (Cloverleaf model)
>WENV180094609	Tyr	GTA
                   c      ACCA ccatccccta
                     G - C
                     G - C
                     A - T
                     C - G
                     G + T
                     G - C
                     A   C          T A
                    A     C G A T C     A
        C G        G      | | | | |     G
      C     G T G G       G C T A G     C
      G       + + +                 T T
      A     G G T T
        G T        A     ATCTGCCCGCGCAAGCGTAC
                    A   A
                    A   A
                    G + T
                    G   G
                    C   T
                  A       C
                  G       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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