The detailed information of tRNA gene sequence


Sequence ID>WENV180094614
Genome IDMTBK01018250
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1542
End posion on genome 1467
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ggtcttgttc
tRNA gene sequence 
GGGCTAGTAGCTCAGTCGGTAGAGCAGCTGACTCTTAATCAGCGGGCCCGGGGTTCGAGT
CCCTGCTAGCCCACCA
Downstream region at tRNA end position 
aaaagaccgc
Secondary structure (Cloverleaf model)
>WENV180094614	Lys	CTT
                   c      ACCA aaaagaccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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