The detailed information of tRNA gene sequence


Sequence ID>WENV180094616
Genome IDMTBK01018312
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 692
End posion on genome 615
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tggttctttT
tRNA gene sequence 
GGGCGACTAGCTCAGCTGGCTAGAGCATCTCGTTTACACCGAGGAGGTCATAGGTTCGAG
TCCTATGTCGCCCATCC
Downstream region at tRNA end position 
cgctaactta
Secondary structure (Cloverleaf model)
>WENV180094616	Val	TAC
                   T      ATCC cgctaactta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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