The detailed information of tRNA gene sequence


Sequence ID>WENV180094619
Genome IDMTBK01018386
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 488
End posion on genome 563
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agctcaacgc
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGCCCAGGACACCGCCCTCTCAAGGCGGGAACACGAGTTCGAAC
CTCGTAGGGAGCGCCA
Downstream region at tRNA end position 
cttcttcttt
Secondary structure (Cloverleaf model)
>WENV180094619	Glu	CTC
                   c      GCCA cttcttcttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     T G C T C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     GAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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