The detailed information of tRNA gene sequence


Sequence ID>WENV180094636
Genome IDMTBK01019745
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1390
End posion on genome 1314
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcttttatgc
tRNA gene sequence 
AGGACTGTAGCTCAATCGGCTAGAGCAGCGGCCTCCAAAGCCGAAGGTTGGGGGTTCGAG
TCCCTCCAGTCCTGCCA
Downstream region at tRNA end position 
tgtttatgca
Secondary structure (Cloverleaf model)
>WENV180094636	Trp	CCA
                   c      GCCA tgtttatgca
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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