The detailed information of tRNA gene sequence


Sequence ID>WENV180094642
Genome IDMTBK01021038
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 373
End posion on genome 447
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcagctcagt
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTTTAGAGCGCGTCGTTCACATCGACGAGGCCGCTGGTTCAAA
TCCAGCATCACCCACgg
Downstream region at tRNA end position 
atttccttga
Secondary structure (Cloverleaf model)
>WENV180094642	Val	CAC
                   t      ACgg atttccttga
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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