The detailed information of tRNA gene sequence


Sequence ID>WENV180094652
Genome IDMTBK01021660
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17076
End posion on genome 17165
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgatagcat
tRNA gene sequence 
GGAGAGATGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGGACCTCTAGGGGTC
CCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaactg
Secondary structure (Cloverleaf model)
>WENV180094652	Ser	CGA
                   t      GCCA caaaaaactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGGACCTCTAGGGGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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