The detailed information of tRNA gene sequence


Sequence ID>WENV180094656
Genome IDMTBK01022187
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 763
End posion on genome 853
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatgggcgc
tRNA gene sequence 
GGAGCGGTGTCCGAGTTGGTCGAAGGAGCAGCACTGGAAATGCTGTAGCGGGGCAACTCG
CTCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gcgtatttcc
Secondary structure (Cloverleaf model)
>WENV180094656	Ser	GGA
                   c      GCCA gcgtatttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  T         A G G A
    C G A          G     TAGCGGGGCAACTCGCTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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