The detailed information of tRNA gene sequence


Sequence ID>WENV180094667
Genome IDMTBK01023313
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 28773
End posion on genome 28686
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataataagat
tRNA gene sequence 
GGAGGGGTAGTCTAATTGGTAAGGCACCGGACTTGAAATCCGGCGGCCCGGAAGGGCCTT
GTGGGTTCGAGTCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
aaatatgtat
Secondary structure (Cloverleaf model)
>WENV180094667	Ser	TGA
                   t      GCCA aaatatgtat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       T C T G       G T G G G     C
    G       | | + |                 T T
    G       A G G C
      T A          A     CGGCCCGGAAGGGCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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