The detailed information of tRNA gene sequence


Sequence ID>WENV180094668
Genome IDMTBK01023526
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1741
End posion on genome 1828
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actcttttta
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAACAGTTTGCTAAACTGTCGTACTCGCAAGGGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
acatctaaaa
Secondary structure (Cloverleaf model)
>WENV180094668	Ser	GCT
                   a      GCaa acatctaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGCAAGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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