The detailed information of tRNA gene sequence


Sequence ID>WENV180094671
Genome IDMTBK01023664
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 99
End posion on genome 174
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttgaaatttt
tRNA gene sequence 
GGGAGCTTAGCTCAGCTGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCAATGGTTCGA
ATCCATTAGTTCCCACaa
Downstream region at tRNA end position 
aaaaaacgag
Secondary structure (Cloverleaf model)
>WENV180094671	Val	TAC
                   t      ACaa aaaaaacgag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     T - A          T A
                    T     T T A C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A A T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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