The detailed information of tRNA gene sequence


Sequence ID>WENV180094681
Genome IDMTBK01024128
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 82670
End posion on genome 82596
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacggcaatt
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCGCTGGTTCAATCC
CAGCACCGCCTACCA
Downstream region at tRNA end position 
tttaaacatc
Secondary structure (Cloverleaf model)
>WENV180094681	Val	CAC
                   t      ACCA tttaaacatc
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C A       G C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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