The detailed information of tRNA gene sequence


Sequence ID>WENV180094682
Genome IDMTBK01024128
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 78060
End posion on genome 77984
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gggattttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
aataaaatca
Secondary structure (Cloverleaf model)
>WENV180094682	fMet	CAT
                   t      ACCA aataaaatca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    T       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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