The detailed information of tRNA gene sequence


Sequence ID>WENV180094689
Genome IDMTBK01024461
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 322
End posion on genome 248
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccacagtcac
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCGGAAGACTCATAATCTTTTGGTCGCAGGTTCAAG
TCCTGCAGGGCCCACac
Downstream region at tRNA end position 
ccccccctgc
Secondary structure (Cloverleaf model)
>WENV180094689	Ile2	CAT
                   c      ACac ccccccctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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