The detailed information of tRNA gene sequence


Sequence ID>WENV180094693
Genome IDMTBK01024867
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 172
End posion on genome 248
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttcttggtac
tRNA gene sequence 
GGGCCTTTAGCTCAGCTGGCTAGAGCATCTGACTCTTAATCAGGGGGTCCGGGGTTCGAG
TCCCCGAAGGCCCACCA
Downstream region at tRNA end position 
tcttaaatcg
Secondary structure (Cloverleaf model)
>WENV180094693	Lys	CTT
                   c      ACCA tcttaaatcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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