The detailed information of tRNA gene sequence


Sequence ID>WENV180094711
Genome IDMTBK01026496
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 669
End posion on genome 763
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcctttgt
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGTCGAAGGCGCTCGCCTGGAAAGCGAGTAGACGGGCAAAACC
TTGTCTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tctttacgat
Secondary structure (Cloverleaf model)
>WENV180094711	Ser	GGA
                   t      GCCA tctttacgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAGACGGGCAAAACCTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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