The detailed information of tRNA gene sequence


Sequence ID>WENV180094717
Genome IDMTBK01026868
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5731
End posion on genome 5656
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttaatgctc
tRNA gene sequence 
GGAGCTGTGGTGTAGCGGTTAACATGCCGGCCTGTCAAGCCGGAGATCGCGGGTTCAATT
CCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
cttgccgaga
Secondary structure (Cloverleaf model)
>WENV180094717	Asp	GTC
                   c      GCCA cttgccgaga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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