The detailed information of tRNA gene sequence


Sequence ID>WENV180094720
Genome IDMTBK01026868
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5480
End posion on genome 5407
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccattcttca
tRNA gene sequence 
GGCGACATAGCCAAGCGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCAAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV180094720	Cys	GCA
                   a      TCCA ttttttttgc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      C     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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