The detailed information of tRNA gene sequence


Sequence ID>WENV180094725
Genome IDMTBK01027007
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 806
End posion on genome 879
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggtcgctc
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGCAGAGCACGCGGCTCATAATCGCGGCGTCGCGGGTTCGAGT
CCCGCCACCGCTACtc
Downstream region at tRNA end position 
accgaacggc
Secondary structure (Cloverleaf model)
>WENV180094725	Met	CAT
                   c      ACtc accgaacggc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G C C C     A
      A G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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