The detailed information of tRNA gene sequence


Sequence ID>WENV180094728
Genome IDMTBK01027227
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1005
End posion on genome 918
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttatatacc
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTTAAACCAACAGTTTGCTAAACTGTCGTATGGGTAACTGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCta
Downstream region at tRNA end position 
ggcagccttt
Secondary structure (Cloverleaf model)
>WENV180094728	Ser	GCT
                   c      GCta ggcagccttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTATGGGTAACTGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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