The detailed information of tRNA gene sequence


Sequence ID>WENV180094730
Genome IDMTBK01027432
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 727
End posion on genome 655
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctctagctg
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTAGCTTTGCAAGCTGGATGTCGCAGGTTCGATC
CCTGTCAGCTCCAggc
Downstream region at tRNA end position 
tggagttatt
Secondary structure (Cloverleaf model)
>WENV180094730	Ala	TGC
                   g      Aggc tggagttatt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ATGTC
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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