The detailed information of tRNA gene sequence


Sequence ID>WENV180094731
Genome IDMTBK01027438
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 169
End posion on genome 245
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttagaagtt
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGTAGCGCGTCTGGTTTGGGACCAGAAAGTCGCAGGTTCGAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
ttatcagaac
Secondary structure (Cloverleaf model)
>WENV180094731	Pro	TGG
                   t      ACCA ttatcagaac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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