The detailed information of tRNA gene sequence


Sequence ID>WENV180094733
Genome IDMTBK01027495
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1530
End posion on genome 1456
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatctgttgT
tRNA gene sequence 
GTCCGGATGGTGTAGTGGCCCATCATGAAGGCCTGTCGAGCCTTCGACCCGGGTTCGAAT
CCCGGTCCGGGCGTtt
Downstream region at tRNA end position 
tatttcctgt
Secondary structure (Cloverleaf model)
>WENV180094733	Asp	GTC
                   T      GTtt tatttcctgt
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        G     CGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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