The detailed information of tRNA gene sequence


Sequence ID>WENV180094734
Genome IDMTBK01027563
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12674
End posion on genome 12760
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttaaaatgt
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCAAAGGTTTGCTAAACCTTGGCGCTTTCGGCGCCT
CGTGGGTTCGAATCCCACCCCTTCCGCtc
Downstream region at tRNA end position 
tcttgttaaa
Secondary structure (Cloverleaf model)
>WENV180094734	Ser	GCT
                   t      GCtc tcttgttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     GGCGCTTTCGGCGCCTC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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