The detailed information of tRNA gene sequence


Sequence ID>WENV180094736
Genome IDMTBK01027585
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13746
End posion on genome 13835
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gttataaaag
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCTACGTAAGAGG
GACCGGGGGTTCGAATCCCCCCCTCTCCGCaa
Downstream region at tRNA end position 
ttttttcaac
Secondary structure (Cloverleaf model)
>WENV180094736	Ser	CGA
                   g      GCaa ttttttcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCTACGTAAGAGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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