The detailed information of tRNA gene sequence


Sequence ID>WENV180094746
Genome IDMTBK01027950
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 238273
End posion on genome 238198
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gtgatgattt
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCAACGGACTCTTAATCCGTGGGTCGCAGGTTCGATC
CCTGCACGGCCTACCA
Downstream region at tRNA end position 
gatcgaagaa
Secondary structure (Cloverleaf model)
>WENV180094746	Lys	CTT
                   t      ACCA gatcgaagaa
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A          C T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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