The detailed information of tRNA gene sequence


Sequence ID>WENV180094748
Genome IDMTBK01028143
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 316
End posion on genome 224
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagaccaagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCGCTCGCCTCGAAAGCGAGTAGGCGGGTAGCCCCT
GCCTCGTGAGTTCGAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
ctattgagct
Secondary structure (Cloverleaf model)
>WENV180094748	Ser	CGA
                   c      GCCA ctattgagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAGGCGGGTAGCCCCTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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