The detailed information of tRNA gene sequence


Sequence ID>WENV180094749
Genome IDMTBK01028143
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 209
End posion on genome 116
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgagctttgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTTGGTTGAAGGCGCCCGCCTGGAGAGCGGGTAGGCAGAAGCTCTC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tattttgtca
Secondary structure (Cloverleaf model)
>WENV180094749	Ser	GGA
                   c      GCCA tattttgtca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G C G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAGGCAGAAGCTCTCTGTCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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