The detailed information of tRNA gene sequence


Sequence ID>WENV180094754
Genome IDMTBK01028195
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 21133
End posion on genome 21060
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcattgact
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGTGTCGAGAGTTCGAGC
CTTTCCACCCGTGCaa
Downstream region at tRNA end position 
agagaaaaca
Secondary structure (Cloverleaf model)
>WENV180094754	Trp	CCA
                   t      GCaa agagaaaaca
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C T T T C     A
      T G A        A      | | + | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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