The detailed information of tRNA gene sequence


Sequence ID>WENV180094756
Genome IDMTBK01028461
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 133
End posion on genome 41
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccttttttt
tRNA gene sequence 
GGAGGGTTGTCCGAGCTGGCTGAAGGAGCGCGACTGGAAATCGCGTGTACCCGTAAAAGG
GTATCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
aaaaaaggga
Secondary structure (Cloverleaf model)
>WENV180094756	Ser	GGA
                   t      GCCA aaaaaaggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTACCCGTAAAAGGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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