The detailed information of tRNA gene sequence


Sequence ID>WENV180094758
Genome IDMTBK01028548
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 305
End posion on genome 396
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tattagcgcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGATTGCGCCGCACTCGAAATGCGGTGTCCGCCTGCTGG
CGGACCGGGGGTTCGAATCCCCCCCTCTCCGCtg
Downstream region at tRNA end position 
gaaagcctaa
Secondary structure (Cloverleaf model)
>WENV180094758	Ser	CGA
                   c      GCtg gaaagcctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    T T G A        G     TGTCCGCCTGCTGGCGGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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