The detailed information of tRNA gene sequence


Sequence ID>WENV180094760
Genome IDMTBK01028674
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1313
End posion on genome 1237
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgactcaacc
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTTAGAGCGTACGCCTGATAAGCGTAAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
catccggata
Secondary structure (Cloverleaf model)
>WENV180094760	Ile	GAT
                   c      ACCA catccggata
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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