The detailed information of tRNA gene sequence


Sequence ID>WENV180094761
Genome IDMTBK01028699
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1865
End posion on genome 1953
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgcccgtT
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATTGGGGCGGTCTCGAAAACCGTTGTAGCCTTGCGGCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGTta
Downstream region at tRNA end position 
tcggcaatat
Secondary structure (Cloverleaf model)
>WENV180094761	Ser	CGA
                   T      GTta tcggcaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TGTAGCCTTGCGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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