The detailed information of tRNA gene sequence


Sequence ID>WENV180094762
Genome IDMTBK01028730
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3267
End posion on genome 3195
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnntgaggga
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCGAAT
CGCAGTGGCCCCAtcg
Downstream region at tRNA end position 
tatcattttt
Secondary structure (Cloverleaf model)
>WENV180094762	Pro	GGG
                   a      Atcg tatcattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C          T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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