The detailed information of tRNA gene sequence


Sequence ID>WENV180094778
Genome IDMTBK01030213
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 397
End posion on genome 322
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attaaaactt
tRNA gene sequence 
GCCTCCGTAGCTCAGAGGATAGAGCAGTTCCCTTCTAAGGAAAAGGTCGGGGGTTCGACT
CCCTCCGGAGGCGCCA
Downstream region at tRNA end position 
taaaaaatat
Secondary structure (Cloverleaf model)
>WENV180094778	Arg	TCT
                   t      GCCA taaaaaatat
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T C
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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