The detailed information of tRNA gene sequence


Sequence ID>WENV180094791
Genome IDMTBK01030874
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12
End posion on genome 88
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatattgctt
tRNA gene sequence 
GGAGCCGTGGTGTAGTTGGTTAACACGTCGGCCTGTCACGCCGAAGATCGCGAGTTCGAG
TCTCGTCGGTTCCGCCA
Downstream region at tRNA end position 
ttttttgcct
Secondary structure (Cloverleaf model)
>WENV180094791	Asp	GTC
                   t      GCCA ttttttgcct
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        G      + | | | |     G
    T       T G T G       G C G A G     C
    G       | | | |                 T T
    G       A C A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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